The detailed information of tRNA gene sequence


Sequence ID>WENV180096010
Genome IDMTBK01102576
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 414
End posion on genome 489
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
catttgtcct
tRNA gene sequence 
GGGGGCTTAGCTCAGTTGGGAGAGCGATTGCTTTGCACGCAATAGGTCAGCGGTTCGAAT
CCGCTAGCCTCCACCA
Downstream region at tRNA end position 
cactcttgta
Secondary structure (Cloverleaf model)
>WENV180096010	Ala	TGC
                   t      ACCA cactcttgta
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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