The detailed information of tRNA gene sequence


Sequence ID>WENV180096012
Genome IDMTBK01102763
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 216
End posion on genome 288
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ataaacttgt
tRNA gene sequence 
GGCGCGGTGGCGAAGTGGAAACGCTGGGGTCTGCAAAACCTCGATGCGAGGGTTCGATTC
CCTCCCGCGCCTCaa
Downstream region at tRNA end position 
gaagaaaata
Secondary structure (Cloverleaf model)
>WENV180096012	Cys	GCA
                   t      TCaa gaagaaaata
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     C T C C C     A
        G A        G      | | | | |     G
      T     A G C G       G A G G G     C
      G       | | |                 T T
      G     A C G C
        A A        T     GATGC
                    G - C
                    G + T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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