The detailed information of tRNA gene sequence


Sequence ID>WENV180096025
Genome IDMTBK01103914
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 226
End posion on genome 300
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cttatttttt
tRNA gene sequence 
AGGCGCGTAGCTCAGGGGGAGAGCACTTCCTTGACACGGAAGGGGTCAGCGGTTCAAATC
CGCTCGCGCCTACCA
Downstream region at tRNA end position 
gaaaaacacc
Secondary structure (Cloverleaf model)
>WENV180096025	Val	GAC
                   t      ACCA gaaaaacacc
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        A      | | | | |     A
      G     C T C G       A G C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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