The detailed information of tRNA gene sequence


Sequence ID>WENV180096027
Genome IDMTBK01104069
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2388
End posion on genome 2462
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aattgttctt
tRNA gene sequence 
GGTCTGGTAGTTCAGCTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCAGACCGCag
Downstream region at tRNA end position 
ggaaagcagc
Secondary structure (Cloverleaf model)
>WENV180096027	Asp	GTC
                   t      GCag ggaaagcagc
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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