The detailed information of tRNA gene sequence


Sequence ID>WENV180096029
Genome IDMTBK01104100
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 13443
End posion on genome 13369
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agtaagaagt
tRNA gene sequence 
GGCCTCGTCGTATAGTGGTTAGTATACCGGGCTCTCAACCCGGAGGTGCGGGTTCGATTC
CCGCCGAGGCTACCA
Downstream region at tRNA end position 
gtgtgtgtgg
Secondary structure (Cloverleaf model)
>WENV180096029	Glu	CTC
                   t      ACCA gtgtgtgtgg
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A T G       G C G G G     C
    G       + | | +                 T T
    T       G T A T
      T A          A     AGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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