The detailed information of tRNA gene sequence


Sequence ID>WENV180096030
Genome IDMTBK01104100
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 13360
End posion on genome 13285
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cagtgtgtgt
tRNA gene sequence 
GGGGCCGTAGCTCAACTGGCAGAGCCACCGGCTCATAACCGGAAGGTTCCAGGTTCGAGT
CCTGGCGGCCCCACCA
Downstream region at tRNA end position 
caagttggcc
Secondary structure (Cloverleaf model)
>WENV180096030	Ile2	CAT
                   t      ACCA caagttggcc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G G T C C     A
      C A A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          C     AGGTT
                    A   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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