The detailed information of tRNA gene sequence


Sequence ID>WENV180096031
Genome IDMTBK01104100
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 13278
End posion on genome 13203
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accacaagtt
tRNA gene sequence 
GGCCCCATCGTCTAGAGGCCTAGGACATCACCCTTTCAAGGTGGAGGCGGGGGTTCGAAT
CCCCCTGGGGCCACCA
Downstream region at tRNA end position 
tttttagttt
Secondary structure (Cloverleaf model)
>WENV180096031	Glu	TTC
                   t      ACCA tttttagttt
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGGC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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