The detailed information of tRNA gene sequence


Sequence ID>WENV180096033
Genome IDMTBK01104123
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 114
End posion on genome 190
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
caagcatcgc
tRNA gene sequence 
GCGCCGGTAGCTCAATTGGATAGAGCATCGGACTACGGATCCGAAGGTTACGGGTTCGAC
TCCTGTCCGGCGCGCCA
Downstream region at tRNA end position 
ttaaaatagg
Secondary structure (Cloverleaf model)
>WENV180096033	Arg	ACG
                   c      GCCA ttaaaatagg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     T G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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