The detailed information of tRNA gene sequence


Sequence ID>WENV180096034
Genome IDMTBK01104183
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 172
End posion on genome 98
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gttgcggacc
tRNA gene sequence 
GGCCCCATGGTCAAGTGGTCAAGACGTCGCCCTCTCACGGCGAAATCAGGAGTTCGACTC
TCCTTGGGGTCACCA
Downstream region at tRNA end position 
aaacgcggct
Secondary structure (Cloverleaf model)
>WENV180096034	Glu	CTC
                   c      ACCA aaacgcggct
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     T C C T C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G A G     C
    G         | | |                 T T
    T       A G A C
      C A          G     AATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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