The detailed information of tRNA gene sequence


Sequence ID>WENV180096038
Genome IDMTBK01104583
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2398
End posion on genome 2323
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgcacagctt
tRNA gene sequence 
GGGGCAGTAGCTCAGTTGGTAGAGCATTACGTTCGCAACGTAGGGGTCGAGGGTTCGAAT
CCCTTCTGCTCCACCA
Downstream region at tRNA end position 
tgctgcacat
Secondary structure (Cloverleaf model)
>WENV180096038	Ala	CGC
                   t      ACCA tgctgcacat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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