The detailed information of tRNA gene sequence


Sequence ID>WENV180096040
Genome IDMTBK01104744
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1305
End posion on genome 1219
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttcgtttcga
tRNA gene sequence 
GCCGAAGTGGTGGAATTGGTAGACACGCTAGGTTCAGGGTCTAGTGACCGTAGGGTCGTG
GGAGTTCGAGTCTCCCCTTCGGCACCA
Downstream region at tRNA end position 
gagtttataa
Secondary structure (Cloverleaf model)
>WENV180096040	Leu	CAG
                   a      ACCA gagtttataa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C C C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G G G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGACCGTAGGGTCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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