The detailed information of tRNA gene sequence


Sequence ID>WENV180096044
Genome IDMTBK01105111
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1009
End posion on genome 1085
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcctttcgg
tRNA gene sequence 
GGCGGGGTAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCTCCCGCTACCA
Downstream region at tRNA end position 
attttctcct
Secondary structure (Cloverleaf model)
>WENV180096044	Met	CAT
                   g      ACCA attttctcct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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