The detailed information of tRNA gene sequence


Sequence ID>WENV180096049
Genome IDMTBK01105393
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9445
End posion on genome 9371
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cacgggttga
tRNA gene sequence 
AGCGAGGTGGGGTAGTCAGGAAATCCCGGCGGGCTCATAACCCGTAGATCGATGGTTCAA
ATCCATCCCTCGCTAtct
Downstream region at tRNA end position 
gctgttttcg
Secondary structure (Cloverleaf model)
>WENV180096049	fMet	CAT
                   a      Atct gctgttttcg
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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