The detailed information of tRNA gene sequence


Sequence ID>WENV180096050
Genome IDMTBK01105422
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 14887
End posion on genome 14961
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cgttgcggac
tRNA gene sequence 
GGCCCCATGGTCAAGTGGTCAAGACGTCGCCCTCTCACGGCGAAATCAGGAGTTCGACTC
TCCTTGGGGTCACCA
Downstream region at tRNA end position 
ggacgcggcc
Secondary structure (Cloverleaf model)
>WENV180096050	Glu	CTC
                   c      ACCA ggacgcggcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     T C C T C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G A G     C
    G         | | |                 T T
    T       A G A C
      C A          G     AATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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