The detailed information of tRNA gene sequence


Sequence ID>WENV180096054
Genome IDMTBK01105763
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 446
End posion on genome 520
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gattgctttt
tRNA gene sequence 
GGGGACGTAGCTCAGGGGGAGAGCGCTTGACTCACATTCAAGAGGTCGGAGGTTCAAATC
CTCTCGTCCCCACCA
Downstream region at tRNA end position 
caaggaaacc
Secondary structure (Cloverleaf model)
>WENV180096054	Val	CAC
                   t      ACCA caaggaaacc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
        G A        A      + | | | |     A
      G     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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