The detailed information of tRNA gene sequence


Sequence ID>WENV180096059
Genome IDMTBK01106153
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 355
End posion on genome 281
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccgctccatt
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGACTGCAAATCCTTTATTCCCCAGTTCAAATC
TGGGTGCCGCCTCCA
Downstream region at tRNA end position 
agtgccgggg
Secondary structure (Cloverleaf model)
>WENV180096059	Cys	GCA
                   t      TCCA agtgccgggg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     A
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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