The detailed information of tRNA gene sequence


Sequence ID>WENV180096064
Genome IDMTBK01106791
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 8885
End posion on genome 8811
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
caccccggaa
tRNA gene sequence 
CGGGCTGTGGCGCAGGTTGGTAGCGCGCTTGACTGGGGGTCAAGAGGTCGCAGGTTCAAA
TCCTGTCAGCCCGACac
Downstream region at tRNA end position 
aacacgacga
Secondary structure (Cloverleaf model)
>WENV180096064	Pro	GGG
                   a      ACac aacacgacga
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G T C C     A
      G G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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