The detailed information of tRNA gene sequence


Sequence ID>WENV180096065
Genome IDMTBK01106800
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1778
End posion on genome 1852
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gttgttcttc
tRNA gene sequence 
GGGCCTATAGCTCAGGCGGTTAGAGCGCTTCGCTGATAACGAAGAGGTCGGAGGTTCGAG
TCCTCCTAGGCCCACga
Downstream region at tRNA end position 
tgtcccgatc
Secondary structure (Cloverleaf model)
>WENV180096065	Ile	GAT
                   c      ACga tgtcccgatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     C C T C C     A
      G G A        A      | | | | |     G
    C       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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