The detailed information of tRNA gene sequence


Sequence ID>WENV180096066
Genome IDMTBK01106800
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2008
End posion on genome 2081
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccggtgacga
tRNA gene sequence 
GGGGCCTTAGCTCAGTTGGTAGAGCGCTGCCTTTGCAAGGCAGATGTCAGGAGTTCGAAT
CTCCTAGGCTCCACtc
Downstream region at tRNA end position 
tcagagaaca
Secondary structure (Cloverleaf model)
>WENV180096066	Ala	TGC
                   a      ACtc tcagagaaca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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