The detailed information of tRNA gene sequence


Sequence ID>WENV180096070
Genome IDMTBK01106916
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 573
End posion on genome 648
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgcgatatgt
tRNA gene sequence 
GGGGCTGTAGTTCAGCTGGGAGAACACCACACTGGCAGTGTGGATGTCAGGGGTTCGAGT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
tttactcttc
Secondary structure (Cloverleaf model)
>WENV180096070	Ala	GGC
                   t      ACCA tttactcttc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T T G       A G G G G     C
    G       | | | |                 T T
    G       G A A C
      G A          A     ATGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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