The detailed information of tRNA gene sequence


Sequence ID>WENV180096071
Genome IDMTBK01107165
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 596
End posion on genome 521
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aagtaaaaat
tRNA gene sequence 
GCATTCTTAGCTCAGTTGGTAGAGCAACTGACTCTTAATCAGTGGGTCCGGGGTTCGAGT
CCCCGAGAGTGTACCA
Downstream region at tRNA end position 
gtttaaaata
Secondary structure (Cloverleaf model)
>WENV180096071	Lys	CTT
                   t      ACCA gtttaaaata
                     G + T
                     C - G
                     A - T
                     T + G
                     T - A
                     C - G
                     T - A          T G
                    T     G C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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