The detailed information of tRNA gene sequence


Sequence ID>WENV180096077
Genome IDMTBK01107718
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1455
End posion on genome 1540
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatatagag
tRNA gene sequence 
GGAGGATTAGTCCTAATTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTATGCCCTTGG
GGGTTCGAATCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
gaaaaataag
Secondary structure (Cloverleaf model)
>WENV180096077	Ser	TGA
                   g      GCCA gaaaaataag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTATGCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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