The detailed information of tRNA gene sequence


Sequence ID>WENV180096082
Genome IDMTBK01107918
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 500
End posion on genome 415
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttatacatta
tRNA gene sequence 
GGAGGGGTGCCCGAGTGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCGGACGCCTTCGA
AGGTTCAAATCCTTCTCCCTCCACCA
Downstream region at tRNA end position 
ccgtgcggaa
Secondary structure (Cloverleaf model)
>WENV180096082	Tyr	GTA
                   a      ACCA ccgtgcggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCGGACGCCTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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