The detailed information of tRNA gene sequence


Sequence ID>WENV180096090
Genome IDMTBK01108672
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 901
End posion on genome 991
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatagcttgc
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCGAAAGCGCTCGCCTCGAAAGCGAGTAGGCGGGGAACCGC
CTCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tagattctga
Secondary structure (Cloverleaf model)
>WENV180096090	Ser	CGA
                   c      GCCA tagattctga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           | | |                 T T
  T         A A G C
    C G A          G     TAGGCGGGGAACCGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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