The detailed information of tRNA gene sequence


Sequence ID>WENV180096093
Genome IDMTBK01108927
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 413
End posion on genome 487
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcttgctaac
tRNA gene sequence 
GGGGGCGTAGCGAAGTTGGTTATCGCGACGGCCTGTCACGCCGTAGATCGCCGGTTCGAG
TCCGGTCGTCCTCGCtt
Downstream region at tRNA end position 
tagacaccgc
Secondary structure (Cloverleaf model)
>WENV180096093	Asp	GTC
                   c      GCtt tagacaccgc
                     G - C
                     G + T
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T G G C C     A
      T G A        A      + | | | |     G
    T       A G C G       G C C G G     C
    G       | | | |                 T T
    G       T C G C
      T T A        G     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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