The detailed information of tRNA gene sequence


Sequence ID>WENV180096094
Genome IDMTBK01109078
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 179
End posion on genome 254
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaatatccgt
tRNA gene sequence 
TCCGCGGTAGCTCAGTCGGTAGAGCGGGTGGCTGTTAACCACTAGGTCACAGGTTCGAGT
CCTGTCCGCGGAGCCA
Downstream region at tRNA end position 
gtcatgccca
Secondary structure (Cloverleaf model)
>WENV180096094	Asn	GTT
                   t      GCCA gtcatgccca
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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