The detailed information of tRNA gene sequence


Sequence ID>WENV180096096
Genome IDMTBK01109179
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4895
End posion on genome 4969
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggttcgttgg
tRNA gene sequence 
AGCGAGGTGGGGTAGCCAGGAAATCCCGGCGGGCTCATAACCCGTAGACCGATGGTTCAA
ATCCATCCCTCGCTAtat
Downstream region at tRNA end position 
tcttttgtcc
Secondary structure (Cloverleaf model)
>WENV180096096	fMet	CAT
                   g      Atat tcttttgtcc
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C C G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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