The detailed information of tRNA gene sequence


Sequence ID>WENV180096101
Genome IDMTBK01109637
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 449
End posion on genome 523
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gctcattact
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGCTAGAGCGCTTGATTTGCATTCAAGAGGTCAAGGGTTCGAC
TCCCTTATTCTCCACag
Downstream region at tRNA end position 
cccctcccgg
Secondary structure (Cloverleaf model)
>WENV180096101	Ala	TGC
                   t      ACag cccctcccgg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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