The detailed information of tRNA gene sequence


Sequence ID>WENV180096102
Genome IDMTBK01109651
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1012
End posion on genome 920
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcttcgtgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCTTGGAAAGCGTGTGTATGCTCGCAAGGT
GTACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tattcccaat
Secondary structure (Cloverleaf model)
>WENV180096102	Ser	GGA
                   c      GCCA tattcccaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTATGCTCGCAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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