The detailed information of tRNA gene sequence


Sequence ID>WENV180096108
Genome IDMTBK01110318
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 231
End posion on genome 140
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaatcgctt
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCTAAGGCGCACGACTGGAAATCGTGTGTCGCCCTTAAAGC
GACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
caaacccact
Secondary structure (Cloverleaf model)
>WENV180096108	Ser	GGA
                   t      GCCA caaacccact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TGTCGCCCTTAAAGCGACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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