The detailed information of tRNA gene sequence


Sequence ID>WENV180096109
Genome IDMTBK01110473
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 350
End posion on genome 441
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atataaatac
tRNA gene sequence 
GGAAGTGTGACCGAGCTGGCCGAAGGTGCACGACTGGAAATCGTGTGTACCCCATAAGGG
TACCAAGGGTTCAAATCCCTTCGCTTCCGCCA
Downstream region at tRNA end position 
tagacacacg
Secondary structure (Cloverleaf model)
>WENV180096109	Ser	GGA
                   c      GCCA tagacacacg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T T C C C     A
    T C G A        G      | | | | |     A
  G         G C C A       A A G G G     C
  G           | | |                 T T
  C         A G G T
    C G A          G     TGTACCCCATAAGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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