The detailed information of tRNA gene sequence


Sequence ID>WENV180096115
Genome IDMTBK01110974
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 661
End posion on genome 735
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
actttcacaT
tRNA gene sequence 
GGCCCTCTAGCTCAACTGGCAGAGCAGTTGACTCTTAATCAATTGGTTCGGAGTTCGAGT
CTCCGGAGGGTCATtt
Downstream region at tRNA end position 
attatttaaa
Secondary structure (Cloverleaf model)
>WENV180096115	Lys	CTT
                   T      ATtt attatttaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G          T G
                    T     G C C T C     A
      C A A        A      | | | | |     G
    T       C T C G       C G G A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     TGGTT
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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