The detailed information of tRNA gene sequence


Sequence ID>WENV180096117
Genome IDMTBK01111088
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1497
End posion on genome 1421
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
acccctcatg
tRNA gene sequence 
GTGGGCGTAGCTCAGTTGGTTAGAGCGTCAGATTGTGGCTCTGAAGGCCGGGGGTTCGAT
TCCCCTCGCTCACCCCA
Downstream region at tRNA end position 
agcagcccgg
Secondary structure (Cloverleaf model)
>WENV180096117	His	GTG
                   g      CCCA agcagcccgg
                     G - C
                     T - A
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T T
                    T     T C C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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