The detailed information of tRNA gene sequence


Sequence ID>WENV180096118
Genome IDMTBK01111088
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1335
End posion on genome 1263
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttcggcttat
tRNA gene sequence 
CCGCCTCTAGCTCAACGGCAGAGCAGTGGACTCTTAATCCATTGGTTCTGGGTTCGAATC
CCAGGGGGCGGACtg
Downstream region at tRNA end position 
ttgtcggcag
Secondary structure (Cloverleaf model)
>WENV180096118	Lys	CTT
                   t      ACtg ttgtcggcag
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G          T A
                    T     G A C C C     A
        A A        A      | | | | |     G
      C     C T C G       C T G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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