The detailed information of tRNA gene sequence


Sequence ID>WENV180096125
Genome IDMTBK01111325
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 43
End posion on genome 118
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
caggtaatgt
tRNA gene sequence 
GGCTCGATAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGTGTCCCTGGTTCGATT
CCTGGTCGAGCCACCA
Downstream region at tRNA end position 
ggtatggcgc
Secondary structure (Cloverleaf model)
>WENV180096125	Phe	GAA
                   t      ACCA ggtatggcgc
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T T
                    T     G G T C C     A
      T G A        A      | |   | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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