The detailed information of tRNA gene sequence


Sequence ID>WENV180096126
Genome IDMTBK01111325
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 124
End posion on genome 198
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caccaggtat
tRNA gene sequence 
GGCGCTATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATTCCCCGGTTCAAATC
CGGGTGGCGCCTCCA
Downstream region at tRNA end position 
taaaacctac
Secondary structure (Cloverleaf model)
>WENV180096126	Cys	GCA
                   t      TCCA taaaacctac
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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