The detailed information of tRNA gene sequence


Sequence ID>WENV180096127
Genome IDMTBK01111404
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 208
End posion on genome 283
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atctaaaaac
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGTGTCGGGCGTTCGAGT
CGCTCCTCCCGTGCCA
Downstream region at tRNA end position 
caggactgcc
Secondary structure (Cloverleaf model)
>WENV180096127	Trp	CCA
                   c      GCCA caggactgcc
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C G C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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