The detailed information of tRNA gene sequence


Sequence ID>WENV180096132
Genome IDMTBK01111698
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 388
End posion on genome 462
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tacaatgagt
tRNA gene sequence 
TCCGGAATAGCTCAGCGGTAGAGCGGGTGGCTGTTAACCACTAGGCCGGGGGTTCGAATC
CCTCTTCCGGAGCCA
Downstream region at tRNA end position 
ttttttttgc
Secondary structure (Cloverleaf model)
>WENV180096132	Asn	GTT
                   t      GCCA ttttttttgc
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
        G A        A      | + | | |     G
      C     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGCC
                    G + T
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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