The detailed information of tRNA gene sequence


Sequence ID>WENV180096133
Genome IDMTBK01111738
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3
End posion on genome 87
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
GCCCAGATGGTGAAATTGGTAGACACGCCAGCTTGAGGGGCTGGTGCCGGCAACGGTGTG
CAAGTTCGAGTCTTGTTCTGGGCACaa
Downstream region at tRNA end position 
attcatttta
Secondary structure (Cloverleaf model)
>WENV180096133	Leu	GAG
                   t      ACaa attcatttta
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T G T T C     A
      T A A        G      + | | | |     G
    T       A G T G       G C A A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCCGGCAACGGTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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