The detailed information of tRNA gene sequence


Sequence ID>WENV180096134
Genome IDMTBK01111911
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2550
End posion on genome 2477
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
acaaaaaaat
tRNA gene sequence 
GCGGAAGTAGCTCAGTTGGCAGAGCATCAGCTTCCCAAGCTGAGGGTCGCGGGTTCGAAT
CCCGTTTTCCGCTCat
Downstream region at tRNA end position 
agcaaatttt
Secondary structure (Cloverleaf model)
>WENV180096134	Gly	CCC
                   t      TCat agcaaatttt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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