The detailed information of tRNA gene sequence


Sequence ID>WENV180096137
Genome IDMTBK01112107
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1331
End posion on genome 1257
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
tcttatctgc
tRNA gene sequence
CGGGGTGTAGCGCAGACGGCCAGCGCGCCGCGTTTGGGACGCGGAGGTCGGCGGTTCAAG
TCCGCCCACCCCGACtg
Downstream region at tRNA end position
acggttgaat
Secondary structure (Cloverleaf model)
>WENV180096137	Pro	TGG
                   c      ACtg acggttgaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C C G C C     A
      A G A        A      | | | | |     A
    C       C G C G       G G C G G     C
    G       | | | |                 T T
    G       G C G C
      C C A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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