The detailed information of tRNA gene sequence


Sequence ID>WENV180096140
Genome IDMTBK01112132
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 471
End posion on genome 562
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agagctattT
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTTAAGGCAACGGTTTGCTAAACCGTCGTGTCTCTTATAGGG
GCACCCCGGGTTCGAATCCCGGCCTCTCCGAtt
Downstream region at tRNA end position 
tttctnnnnn
Secondary structure (Cloverleaf model)
>WENV180096140	Ser	GCT
                   T      GAtt tttctnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C C G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        A     CGTGTCTCTTATAGGGGCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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