The detailed information of tRNA gene sequence


Sequence ID>WENV180096143
Genome IDMTBK01112470
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 108
End posion on genome 32
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ggagccacaa
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
aataaacttg
Secondary structure (Cloverleaf model)
>WENV180096143	Ile2	CAT
                   a      ACCA aataaacttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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