The detailed information of tRNA gene sequence


Sequence ID>WENV180096150
Genome IDMTBK01113178
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 291
End posion on genome 218
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcttgttaca
tRNA gene sequence 
GGTCCCATCGTCTAGAGGCCTAGGACACTAGATTCTCAATCTAGTAACACCGGTTCGACT
CCGGTTGGGATCACaa
Downstream region at tRNA end position 
atatggaact
Secondary structure (Cloverleaf model)
>WENV180096150	Glu	CTC
                   a      ACaa atatggaact
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     T G G C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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