The detailed information of tRNA gene sequence


Sequence ID>WENV180096154
Genome IDMTBK01113307
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1009
End posion on genome 938
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccccgcattt
tRNA gene sequence 
GGCGCCGTACCCAAGTGGTAAGGGAGAGGTCTGCAAAACCTTTATACATCGGTTCGATTC
CGATCGGCGCCTaat
Downstream region at tRNA end position 
tgagctgtgc
Secondary structure (Cloverleaf model)
>WENV180096154	Cys	GCA
                   t      Taat tgagctgtgc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T A G C C     A
        G A        A      | | | | |     G
      T     A C C C       A T C G G     C
      G       | | |                 T T
      G     A G G G
        T A        A     TATAC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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