The detailed information of tRNA gene sequence


Sequence ID>WENV180096158
Genome IDMTBK01113491
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 235
End posion on genome 162
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gagcctggct
tRNA gene sequence 
GTCGGGATAACACAGAGGCTATGTGGCGGACTGCAGATCCGCAGACGGGAGTTCAAATCT
CCCTCCCGGCCCCA
Downstream region at tRNA end position 
ttctcctttt
Secondary structure (Cloverleaf model)
>WENV180096158	Cys	GCA
                   t      CCCA ttctcctttt
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
        G A        A      | | | | |     A
      A     C A C A       G G G A G     C
      G       | | |                 T T
      G     A T G T
        C T        G     AGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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