The detailed information of tRNA gene sequence


Sequence ID>WENV180096160
Genome IDMTBK01113623
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 171
End posion on genome 257
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accgccagcg
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGTTGAAGGAGCCGGTCTTGAAAACCGGTGACCCGAAAGGGCCG
TGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
aaacagaggc
Secondary structure (Cloverleaf model)
>WENV180096160	Ser	TGA
                   g      GCCA aaacagaggc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGACCCGAAAGGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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