The detailed information of tRNA gene sequence


Sequence ID>WENV180096161
Genome IDMTBK01113623
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 273
End posion on genome 366
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaggcagtcc
tRNA gene sequence 
GGAGAGATGGCCGAGAGGTTGAAGGCGGTCGCCTGCTAAGCGATTAAGTGGGTAAAAACC
TGCTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cgcgcgcccg
Secondary structure (Cloverleaf model)
>WENV180096161	Ser	GCT
                   c      GCCA cgcgcgcccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAAGTGGGTAAAAACCTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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