The detailed information of tRNA gene sequence


Sequence ID>WENV180096168
Genome IDMTBK01113799
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 286
End posion on genome 359
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cctgaaagat
tRNA gene sequence 
GGGCCTGTAGCGCAGCTGGGAGCGCGCCTCAATCGCACTGAGGAGGTCGAGGGTTCAAAT
CCCTCCAGGTCCACtc
Downstream region at tRNA end position 
tggtgccccg
Secondary structure (Cloverleaf model)
>WENV180096168	Ala	CGC
                   t      ACtc tggtgccccg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    T       C G C G       G A G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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