The detailed information of tRNA gene sequence


Sequence ID>WENV180096169
Genome IDMTBK01113799
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 471
End posion on genome 544
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaaccacaac
tRNA gene sequence 
GGGCCCATAGCGCAGTTGGGAGCGCGCCTCAATGGCATTGAGGAGGTCGAGGGTTCGAAT
CCCTCTGGGTCCACta
Downstream region at tRNA end position 
aagaaagggc
Secondary structure (Cloverleaf model)
>WENV180096169	Ala	GGC
                   c      ACta aagaaagggc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    T       C G C G       G A G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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